<p>Although serotonin is well known as a brain neurotransmitter, it is estimated that 90 percent of the body&#039;s serotonin is made in the digestive tract. In fact, altered levels of this peripheral serotonin have been linked to diseases such as irritable bowel syndrome, cardiovascular disease, and osteoporosis. New research at Caltech, published in the April 9 issue of the journalCell, shows that certain bacteria in the gut are important for the production of peripheral serotonin.</p><p>&amp;quot;More and more studies are showing that mice or other model organisms with changes in their gut microbes exhibit altered behaviors,&amp;quot; explains Elaine Hsiao, research assistant professor of biology and biological engineering and senior author of the study. &amp;quot;We are interested in how microbes communicate with the nervous system. To start, we explored the idea that normal gut microbes could influence levels of neurotransmitters in their hosts.&amp;quot;Peripheral serotonin is produced in the digestive tract by enterochromaffin (EC) cells and also by particular types of immune cells and neurons. Hsiao and her colleagues first wanted to know if gut microbes have any effect on serotonin production in the gut and, if so, in which types of cells. They began by measuring peripheral serotonin levels in mice with normal populations of gut bacteria and also in germ-free mice that lack these resident microbes.The researchers found that the EC cells from germ-free mice produced approximately 60 percent less serotonin than did their peers with conventional bacterial colonies. When these germ-free mice were recolonized with normal gut microbes, the serotonin levels went back up&amp;mdash;showing that the deficit in serotonin can be reversed.&amp;quot;EC cells are rich sources of serotonin in the gut. What we saw in this experiment is that they appear todepend on microbes to make serotonin&amp;mdash;or at least a large portion of it,&amp;quot; says Jessica Yano, first author on the paper and a research technician working with Hsiao.The researchers next wanted to find out whether specific species of bacteria, out of the diverse pool of microbes that inhabit the gut, are interacting with EC cells to make serotonin.After testing several different single species and groups of known gut microbes, Yano, Hsiao, and colleagues observed that one condition&amp;mdash;the presence of a group of approximately 20 species of spore-forming bacteria&amp;mdash;elevated serotonin levels in germ-free mice. The mice treated with this group also showed an increase in gastrointestinal motility compared to their germ-free counterparts, and changes in the activation of blood platelets, which are known to use serotonin to promote clotting.Wanting to home in on mechanisms that could be involved in this interesting collaboration between microbe and host, the researchers began looking for molecules that might be key. They identified several particular metabolites&amp;mdash;products of the microbes&#039; metabolism&amp;mdash;that were regulated by spore-forming